Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 PSAPL1-201ENST00000319098 4680 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TMEFF2-202ENST00000392314 2842 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 AL359075.2-201ENST00000354921 4998 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 DNMT3B-201ENST00000201963 4255 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 CYP4F24P-201ENST00000586049 1580 ntBASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 BTNL3-201ENST00000342868 2440 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 RAPGEF3-201ENST00000389212 3294 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 RAPGEF3-204ENST00000405493 5751 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LINC01558Q9Y6Z2 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 FAM131A-201ENST00000310585 3677 ntTSL 2 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 ADAMTS20-204ENST00000553158 4633 ntTSL 5 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 CECR3-201ENST00000428828 1915 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 MPP4-201ENST00000315506 2330 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 MPP4-207ENST00000428900 2320 ntTSL 2 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC7.15□□□□□ -1.26
LINC01558Q9Y6Z2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms