Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 AC010900.1-201ENST00000449849 1296 ntBASIC18.8■□□□□ 0.6
PHF8Q9UPP1 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 SNRPD2P2-201ENST00000473818 333 ntBASIC18.8■□□□□ 0.6
PHF8Q9UPP1 AC233724.9-201ENST00000511694 407 ntBASIC18.8■□□□□ 0.6
PHF8Q9UPP1 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 RN7SL134P-201ENST00000579756 303 ntBASIC18.8■□□□□ 0.6
PHF8Q9UPP1 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 AL008638.4-201ENST00000624792 1315 ntBASIC18.79■□□□□ 0.6
PHF8Q9UPP1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 CCL25-202ENST00000315626 450 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 SNRPCP15-201ENST00000424055 192 ntBASIC18.79■□□□□ 0.6
PHF8Q9UPP1 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 AP003040.1-201ENST00000532044 1024 ntBASIC18.79■□□□□ 0.6
PHF8Q9UPP1 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF8Q9UPP1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 STK16-202ENST00000409260 1493 ntTSL 5 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 AC015802.1-201ENST00000588104 1449 ntBASIC18.78■□□□□ 0.6
PHF8Q9UPP1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC18.78■□□□□ 0.6
PHF8Q9UPP1 ISL1-203ENST00000511384 981 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms