Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC016397.2-201ENST00000624848 1985 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PTENP1-202ENST00000532280 3996 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 MSANTD2P1-201ENST00000445341 1368 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC090502.4-201ENST00000551714 1386 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC152010.1-201ENST00000415779 2006 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 BAX-205ENST00000391871 687 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 OR52M2P-201ENST00000414298 959 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AL354861.1-201ENST00000445213 355 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 RPL7P35-201ENST00000446943 740 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 RN7SL81P-201ENST00000493781 261 ntBASIC4.79□□□□□ -1.64
KRTAP4-3Q9BYR4 EEF1GP8-201ENST00000506566 1154 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms