Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 MED15P5-201ENST00000423150 992 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 VDAC1P7-201ENST00000462417 847 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 GIMAP3P-201ENST00000495150 836 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AC044860.1-202ENST00000559481 777 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 RN7SL510P-201ENST00000581311 263 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 TEX28P1-201ENST00000613479 1221 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 TEX28P2-201ENST00000617764 1221 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AL603764.1-201ENST00000636452 321 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 SHC1P1-201ENST00000425230 1745 ntBASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 KRT8P28-201ENST00000433288 1390 ntBASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 HLA-A-201ENST00000376802 1334 ntBASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 HLA-J-203ENST00000494367 1087 ntBASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 SPDYE22P-201ENST00000582158 798 ntBASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC22CQ9BRL7 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 AC061965.1-201ENST00000560524 1465 ntBASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms