Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
USB1Q9BQ65 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.92□□□□□ -0.34
USB1Q9BQ65 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
USB1Q9BQ65 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 INE2-201ENST00000630399 1874 ntBASIC12.91□□□□□ -0.34
USB1Q9BQ65 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 NOC2LP1-201ENST00000450578 752 ntBASIC12.91□□□□□ -0.34
USB1Q9BQ65 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AC009088.1-201ENST00000565152 833 ntBASIC12.91□□□□□ -0.34
USB1Q9BQ65 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 MIR6720-201ENST00000611664 98 ntBASIC12.91□□□□□ -0.34
USB1Q9BQ65 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 MTCO1P15-201ENST00000529569 1526 ntBASIC12.91□□□□□ -0.34
USB1Q9BQ65 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AC015909.5-201ENST00000624336 2266 ntBASIC12.91□□□□□ -0.34
USB1Q9BQ65 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
USB1Q9BQ65 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 AC004899.1-201ENST00000424687 1714 ntBASIC12.91□□□□□ -0.34
USB1Q9BQ65 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
USB1Q9BQ65 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 AL008718.2-201ENST00000609206 1313 ntBASIC12.9□□□□□ -0.34
USB1Q9BQ65 AC092135.3-201ENST00000624151 1846 ntBASIC12.9□□□□□ -0.34
USB1Q9BQ65 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 AC009093.10-201ENST00000641956 1442 ntBASIC12.9□□□□□ -0.34
USB1Q9BQ65 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 AC018735.1-201ENST00000437208 1502 ntBASIC12.9□□□□□ -0.34
USB1Q9BQ65 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USB1Q9BQ65 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.9□□□□□ -0.34
USB1Q9BQ65 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms