Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 VENTXP3-201ENST00000546480 773 ntBASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SYNGAP1Q96PV0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 GOLGA2P8-201ENST00000505201 779 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AC013553.1-201ENST00000560906 267 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AP005264.6-204ENST00000588436 719 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AL009176.1-201ENST00000607876 650 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AC006483.2-201ENST00000609813 515 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AC117489.1-201ENST00000625169 3217 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 KRT8P43-201ENST00000406052 1458 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 SBF1P1-201ENST00000444527 5631 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AC067750.1-201ENST00000608826 6545 ntBASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SYNGAP1Q96PV0 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 FAM86B3P-203ENST00000523992 854 ntBASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 AC012158.2-201ENST00000536546 354 ntBASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 DNM1P51-201ENST00000558149 522 ntBASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 AC041040.2-201ENST00000622926 2899 ntBASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SYNGAP1Q96PV0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms