Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 DLX4-206ENST00000611342 1662 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.15□□□□□ -0.3
HPS1Q92902 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
HPS1Q92902 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.15□□□□□ -0.3
HPS1Q92902 FAM90A11P-201ENST00000518378 2218 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 AL645937.6-201ENST00000641122 3727 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 AC073310.1-201ENST00000423226 1033 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 MTND2P11-201ENST00000423638 648 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 ACTG1P3-201ENST00000431775 1114 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 BTG3P1-201ENST00000435859 716 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.15□□□□□ -0.3
HPS1Q92902 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.15□□□□□ -0.3
HPS1Q92902 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC13.15□□□□□ -0.3
HPS1Q92902 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.15□□□□□ -0.3
HPS1Q92902 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 AC233724.13-201ENST00000598383 410 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 COX11-210ENST00000639671 696 ntBASIC13.15□□□□□ -0.3
HPS1Q92902 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.15□□□□□ -0.3
HPS1Q92902 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HPS1Q92902 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.15□□□□□ -0.3
HPS1Q92902 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HPS1Q92902 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HPS1Q92902 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HPS1Q92902 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
HPS1Q92902 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
HPS1Q92902 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
HPS1Q92902 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HPS1Q92902 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.14□□□□□ -0.31
HPS1Q92902 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC13.14□□□□□ -0.31
HPS1Q92902 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC13.14□□□□□ -0.31
HPS1Q92902 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms