Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 FAM90A11P-201ENST00000518378 2218 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 SPDYE19P-201ENST00000338590 713 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 KRT18P25-201ENST00000508931 1278 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 BX088702.1-201ENST00000610784 235 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AC004790.1-201ENST00000612686 536 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AC008761.3-201ENST00000624803 892 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AL022313.4-201ENST00000562756 2046 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 AC073335.2-201ENST00000610177 3441 ntBASIC12.28□□□□□ -0.44
BEST4Q8NFU0 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BEST4Q8NFU0 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.27□□□□□ -0.44
BEST4Q8NFU0 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AP000347.1-202ENST00000435868 847 ntBASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AC004890.2-204ENST00000481968 304 ntBASIC12.27□□□□□ -0.45
BEST4Q8NFU0 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AL359711.2-201ENST00000563105 872 ntBASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 BAP1-211ENST00000615113 489 ntBASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AC093028.1-201ENST00000622998 982 ntBASIC12.27□□□□□ -0.45
BEST4Q8NFU0 AC079781.4-201ENST00000641908 219 ntBASIC12.27□□□□□ -0.45
BEST4Q8NFU0 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
BEST4Q8NFU0 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms