Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13CQ709C8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13CQ709C8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13CQ709C8 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13CQ709C8 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13CQ709C8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13CQ709C8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
VPS13CQ709C8 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 DUX4L31-201ENST00000446466 1136 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 AC008267.3-201ENST00000448776 712 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 AL161727.1-201ENST00000457409 530 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 RPL29P2-201ENST00000488409 460 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 AC112250.1-201ENST00000504640 745 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 DLX4-206ENST00000611342 1662 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 AC012531.1-201ENST00000562848 2680 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 AC007622.1-201ENST00000488371 535 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 AC099343.1-201ENST00000513481 609 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 AL136298.3-201ENST00000556746 445 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 MIR6074-201ENST00000612054 107 ntBASIC11.3□□□□□ -0.6
VPS13CQ709C8 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VPS13CQ709C8 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
VPS13CQ709C8 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 KRT18P15-201ENST00000458108 1291 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 CDIPT-AS1-203ENST00000638164 713 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 RN7SL789P-201ENST00000478944 293 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 POLR3DP1-201ENST00000398689 1176 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
VPS13CQ709C8 AP001331.1-201ENST00000413008 1015 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 AC007881.1-201ENST00000437460 187 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 RN7SL47P-201ENST00000488710 299 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 AC104117.4-201ENST00000521486 847 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 SORD2P-201ENST00000558556 1069 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC11.29□□□□□ -0.6
VPS13CQ709C8 AC090616.6-202ENST00000583601 1088 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 AF013593.1-201ENST00000458074 1487 ntBASIC11.29□□□□□ -0.6
VPS13CQ709C8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms