Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 AL157996.1-201ENST00000624684 2299 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 TUBB8P4-201ENST00000511806 1324 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 DUX4L50-201ENST00000455245 715 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 UPF3AP2-201ENST00000457924 1132 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 RN7SL277P-201ENST00000481521 288 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 AC008723.1-201ENST00000506922 207 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 AC242376.1-201ENST00000559033 726 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 RN7SL371P-201ENST00000578099 267 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 AC106872.11-201ENST00000605838 421 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 MEG3_2.1-201ENST00000611456 105 ntBASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 RN7SL769P-201ENST00000469386 295 ntBASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 CHMP4BP1-201ENST00000556017 588 ntBASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 KRT8P1-201ENST00000557533 1207 ntBASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 PHBP15-201ENST00000574228 665 ntBASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 AGAP10P-201ENST00000454844 2418 ntBASIC14.75□□□□□ -0.05
TTC39BQ5VTQ0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms