Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AC012513.2-201ENST00000441511 1137 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 RHPN1-AS1-201ENST00000518049 1918 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 MIR339-201ENST00000362153 94 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AC012100.1-201ENST00000470304 282 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 SNORD55-201ENST00000581525 80 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AL365181.3-201ENST00000605886 3222 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AC114781.1-201ENST00000450559 1028 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 BX510359.7-201ENST00000619819 630 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 AC244097.1-201ENST00000621631 1216 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 PI4KAP2-201ENST00000360806 2080 ntBASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13DQ5THJ4 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 PGAM1P10-201ENST00000402426 761 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 GSTM2P1-201ENST00000405166 654 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 HMGN1P4-201ENST00000419500 290 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AC004910.1-201ENST00000433493 787 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AC139749.1-202ENST00000617529 3139 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 ASS1P1-201ENST00000402854 1237 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AL161727.1-201ENST00000457409 530 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AC009779.7-201ENST00000609031 469 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms