Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCNA1P78396 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.91■□□□□ 0.14
CCNA1P78396 GOLGA6L16P-201ENST00000441780 1299 ntBASIC15.91■□□□□ 0.14
CCNA1P78396 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.91■□□□□ 0.14
CCNA1P78396 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.91■□□□□ 0.14
CCNA1P78396 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.91■□□□□ 0.14
CCNA1P78396 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 AC078814.4-201ENST00000546650 327 ntBASIC15.91■□□□□ 0.14
CCNA1P78396 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CCNA1P78396 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.91■□□□□ 0.14
CCNA1P78396 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.91■□□□□ 0.14
CCNA1P78396 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.91■□□□□ 0.14
CCNA1P78396 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.91■□□□□ 0.14
CCNA1P78396 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.91■□□□□ 0.14
CCNA1P78396 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.91■□□□□ 0.14
CCNA1P78396 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CCNA1P78396 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCNA1P78396 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.9■□□□□ 0.14
CCNA1P78396 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCNA1P78396 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.9■□□□□ 0.14
CCNA1P78396 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.9■□□□□ 0.14
CCNA1P78396 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCNA1P78396 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CCNA1P78396 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CCNA1P78396 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15.9■□□□□ 0.14
CCNA1P78396 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.9■□□□□ 0.14
CCNA1P78396 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.9■□□□□ 0.14
CCNA1P78396 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.9■□□□□ 0.14
CCNA1P78396 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC15.9■□□□□ 0.14
CCNA1P78396 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.9■□□□□ 0.14
CCNA1P78396 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCNA1P78396 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.9■□□□□ 0.14
CCNA1P78396 MME-218ENST00000625667 363 ntTSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 AC139713.2-207ENST00000641556 1292 ntBASIC15.9■□□□□ 0.14
CCNA1P78396 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.9■□□□□ 0.14
CCNA1P78396 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.9■□□□□ 0.14
CCNA1P78396 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.9■□□□□ 0.14
CCNA1P78396 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCNA1P78396 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.14
CCNA1P78396 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCNA1P78396 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.89■□□□□ 0.13
CCNA1P78396 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.89■□□□□ 0.13
CCNA1P78396 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.89■□□□□ 0.13
CCNA1P78396 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCNA1P78396 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.89■□□□□ 0.13
CCNA1P78396 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.89■□□□□ 0.13
CCNA1P78396 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCNA1P78396 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCNA1P78396 U3.5-201ENST00000363448 216 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 AL357373.1-201ENST00000394974 322 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 AC104961.1-201ENST00000427605 771 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCNA1P78396 AC005722.1-201ENST00000431878 964 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.89■□□□□ 0.13
CCNA1P78396 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 ALG1L7P-201ENST00000502317 768 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC15.89■□□□□ 0.13
CCNA1P78396 RN7SL605P-201ENST00000577229 281 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 MIR4326-201ENST00000582203 59 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 AC126755.5-201ENST00000622756 267 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 AL139424.3-202ENST00000641619 917 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms