Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CXCR4P61073 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCR4P61073 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 AC092053.3-201ENST00000641308 4975 ntBASIC12.91□□□□□ -0.34
CXCR4P61073 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
CXCR4P61073 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 MARK2P16-201ENST00000605714 1723 ntBASIC12.91□□□□□ -0.34
CXCR4P61073 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCR4P61073 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CXCR4P61073 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 AC134312.5-201ENST00000568031 1313 ntBASIC12.9□□□□□ -0.34
CXCR4P61073 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCR4P61073 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CXCR4P61073 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CXCR4P61073 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.9□□□□□ -0.34
CXCR4P61073 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCR4P61073 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.9□□□□□ -0.34
CXCR4P61073 AC012441.1-201ENST00000446669 685 ntBASIC12.9□□□□□ -0.34
CXCR4P61073 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCR4P61073 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.9□□□□□ -0.34
CXCR4P61073 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCR4P61073 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.9□□□□□ -0.34
CXCR4P61073 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCR4P61073 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCR4P61073 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CXCR4P61073 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CXCR4P61073 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.9□□□□□ -0.34
CXCR4P61073 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCR4P61073 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CXCR4P61073 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CXCR4P61073 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.35
CXCR4P61073 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CXCR4P61073 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.9□□□□□ -0.35
CXCR4P61073 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CXCR4P61073 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CXCR4P61073 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.9□□□□□ -0.35
CXCR4P61073 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CXCR4P61073 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 AL590824.1-201ENST00000403828 1349 ntBASIC12.89□□□□□ -0.35
CXCR4P61073 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
CXCR4P61073 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
CXCR4P61073 BAATP1-201ENST00000412284 1225 ntBASIC12.89□□□□□ -0.35
CXCR4P61073 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.89□□□□□ -0.35
CXCR4P61073 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 API5-211ENST00000534695 560 ntTSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.89□□□□□ -0.35
CXCR4P61073 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms