Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
CKS1BP61024 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 AC211486.1-202ENST00000416371 468 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.02□□□□□ -0.81
CKS1BP61024 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 NUS1P3-201ENST00000423502 862 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 AC211476.1-201ENST00000503899 468 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.02□□□□□ -0.81
CKS1BP61024 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 AC069262.1-201ENST00000539058 672 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 AL512356.2-201ENST00000546955 174 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 AL512361.1-201ENST00000554200 418 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 SNHG9-202ENST00000564014 471 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 AL596442.2-201ENST00000610240 980 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 AC073592.8-201ENST00000624126 511 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.02□□□□□ -0.81
CKS1BP61024 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 AL365181.2-201ENST00000606343 3222 ntBASIC10.02□□□□□ -0.81
CKS1BP61024 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC10.02□□□□□ -0.81
CKS1BP61024 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
CKS1BP61024 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CKS1BP61024 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 AC005696.4-201ENST00000614400 3147 ntBASIC10.01□□□□□ -0.81
CKS1BP61024 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 AL158070.2-201ENST00000623713 1621 ntBASIC10.01□□□□□ -0.81
CKS1BP61024 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms