Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AP000354.1-201ENST00000396982 456 ntBASIC13.53□□□□□ -0.24
CLDN6P56747 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.53□□□□□ -0.24
CLDN6P56747 AC023141.7-201ENST00000430646 407 ntBASIC13.53□□□□□ -0.24
CLDN6P56747 AC092573.1-201ENST00000433054 884 ntBASIC13.53□□□□□ -0.24
CLDN6P56747 RNLS-203ENST00000437752 525 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC13.53□□□□□ -0.24
CLDN6P56747 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC13.53□□□□□ -0.24
CLDN6P56747 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 RN7SL767P-201ENST00000493013 295 ntBASIC13.53□□□□□ -0.24
CLDN6P56747 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC13.53□□□□□ -0.24
CLDN6P56747 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.53□□□□□ -0.24
CLDN6P56747 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.53□□□□□ -0.24
CLDN6P56747 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 MIR4265-201ENST00000582152 99 ntBASIC13.53□□□□□ -0.24
CLDN6P56747 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 MIR6816-201ENST00000620368 66 ntBASIC13.53□□□□□ -0.24
CLDN6P56747 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 AC139713.2-207ENST00000641556 1292 ntBASIC13.53□□□□□ -0.24
CLDN6P56747 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CLDN6P56747 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 AC026748.1-201ENST00000624349 3251 ntBASIC13.52□□□□□ -0.24
CLDN6P56747 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.52□□□□□ -0.24
CLDN6P56747 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN6P56747 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN6P56747 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CLDN6P56747 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN6P56747 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.52□□□□□ -0.24
CLDN6P56747 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.52□□□□□ -0.24
CLDN6P56747 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN6P56747 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN6P56747 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN6P56747 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN6P56747 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
CLDN6P56747 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDN6P56747 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CLDN6P56747 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CLDN6P56747 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CLDN6P56747 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 AC092903.1-201ENST00000466506 262 ntBASIC13.52□□□□□ -0.25
CLDN6P56747 AC100858.1-201ENST00000514059 1228 ntBASIC13.52□□□□□ -0.25
CLDN6P56747 IGHEP2-201ENST00000519308 1256 ntBASIC13.52□□□□□ -0.25
CLDN6P56747 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CLDN6P56747 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 SORD2P-201ENST00000558556 1069 ntBASIC13.52□□□□□ -0.25
CLDN6P56747 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CLDN6P56747 RN7SL121P-201ENST00000584223 273 ntBASIC13.52□□□□□ -0.25
CLDN6P56747 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN6P56747 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN6P56747 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN6P56747 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN6P56747 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN6P56747 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN6P56747 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN6P56747 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CLDN6P56747 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN6P56747 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CLDN6P56747 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN6P56747 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CLDN6P56747 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CLDN6P56747 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 LINC00552-201ENST00000625151 2579 ntBASIC13.51□□□□□ -0.25
CLDN6P56747 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms