Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.75□□□□□ -0.05
MTHFRP42898 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 PDXDC2P-206ENST00000534700 1315 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MTHFRP42898 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.75□□□□□ -0.05
MTHFRP42898 NHP2P1-201ENST00000335274 462 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
MTHFRP42898 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 PSAT1P2-201ENST00000426107 972 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 AL512599.1-201ENST00000430724 685 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
MTHFRP42898 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.75□□□□□ -0.05
MTHFRP42898 SLC25A15P3-201ENST00000505530 290 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 AC100858.1-201ENST00000514059 1228 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 KRT18P37-201ENST00000520711 1282 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.75□□□□□ -0.05
MTHFRP42898 AC092862.1-201ENST00000541534 533 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.75□□□□□ -0.05
MTHFRP42898 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 MIR5001-201ENST00000580185 100 ntBASIC14.75□□□□□ -0.05
MTHFRP42898 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.75□□□□□ -0.05
MTHFRP42898 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.75□□□□□ -0.05
MTHFRP42898 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.75□□□□□ -0.05
MTHFRP42898 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
MTHFRP42898 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.75□□□□□ -0.05
MTHFRP42898 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
MTHFRP42898 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.75□□□□□ -0.05
MTHFRP42898 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MTHFRP42898 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MTHFRP42898 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
MTHFRP42898 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.74□□□□□ -0.05
MTHFRP42898 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MTHFRP42898 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.74□□□□□ -0.05
MTHFRP42898 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
MTHFRP42898 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.74□□□□□ -0.05
MTHFRP42898 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MTHFRP42898 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.74□□□□□ -0.05
MTHFRP42898 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.74□□□□□ -0.05
MTHFRP42898 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MTHFRP42898 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.74□□□□□ -0.05
MTHFRP42898 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.74□□□□□ -0.05
MTHFRP42898 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 RN7SL288P-201ENST00000490496 291 ntBASIC14.74□□□□□ -0.05
MTHFRP42898 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC14.74□□□□□ -0.05
MTHFRP42898 EEF1GP8-201ENST00000506566 1154 ntBASIC14.74□□□□□ -0.05
MTHFRP42898 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.74□□□□□ -0.05
MTHFRP42898 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MTHFRP42898 AL132994.1-201ENST00000554098 400 ntBASIC14.74□□□□□ -0.05
MTHFRP42898 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.74□□□□□ -0.05
MTHFRP42898 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.74□□□□□ -0.05
MTHFRP42898 AL627230.2-201ENST00000613254 655 ntBASIC14.74□□□□□ -0.05
MTHFRP42898 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.74□□□□□ -0.05
MTHFRP42898 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
MTHFRP42898 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MTHFRP42898 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MTHFRP42898 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
MTHFRP42898 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MTHFRP42898 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms