Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ALMS1P1-201ENST00000428767 921 ntBASIC19.25■□□□□ 0.67
CPS1P31327 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC19.25■□□□□ 0.67
CPS1P31327 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC19.25■□□□□ 0.67
CPS1P31327 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC19.25■□□□□ 0.67
CPS1P31327 AC105424.1-201ENST00000514583 209 ntBASIC19.25■□□□□ 0.67
CPS1P31327 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC19.25■□□□□ 0.67
CPS1P31327 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC19.25■□□□□ 0.67
CPS1P31327 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC19.25■□□□□ 0.67
CPS1P31327 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC19.25■□□□□ 0.67
CPS1P31327 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC19.25■□□□□ 0.67
CPS1P31327 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CPS1P31327 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CPS1P31327 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.25■□□□□ 0.67
CPS1P31327 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CPS1P31327 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CPS1P31327 SOD1-202ENST00000389995 865 ntTSL 3 BASIC19.25■□□□□ 0.67
CPS1P31327 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC19.25■□□□□ 0.67
CPS1P31327 PDPN-208ENST00000509009 571 ntTSL 4 BASIC19.25■□□□□ 0.67
CPS1P31327 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC19.25■□□□□ 0.67
CPS1P31327 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPS1P31327 AC137723.2-201ENST00000623540 398 ntBASIC19.25■□□□□ 0.67
CPS1P31327 AC091905.3-201ENST00000624959 234 ntBASIC19.25■□□□□ 0.67
CPS1P31327 AC002511.3-201ENST00000638098 420 ntBASIC19.25■□□□□ 0.67
CPS1P31327 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPS1P31327 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC19.24■□□□□ 0.67
CPS1P31327 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC19.24■□□□□ 0.67
CPS1P31327 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CPS1P31327 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC19.24■□□□□ 0.67
CPS1P31327 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPS1P31327 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPS1P31327 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPS1P31327 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPS1P31327 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPS1P31327 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPS1P31327 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC19.24■□□□□ 0.67
CPS1P31327 IL6RP1-201ENST00000417848 1273 ntBASIC19.24■□□□□ 0.67
CPS1P31327 AL049792.1-201ENST00000424708 1262 ntBASIC19.24■□□□□ 0.67
CPS1P31327 ASLP1-201ENST00000428790 637 ntBASIC19.24■□□□□ 0.67
CPS1P31327 TMEM256P1-201ENST00000430550 340 ntBASIC19.24■□□□□ 0.67
CPS1P31327 PTPA-219ENST00000435305 530 ntTSL 2 BASIC19.24■□□□□ 0.67
CPS1P31327 RN7SL646P-201ENST00000492969 297 ntBASIC19.24■□□□□ 0.67
CPS1P31327 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC19.24■□□□□ 0.67
CPS1P31327 AC015818.3-201ENST00000583797 589 ntBASIC19.24■□□□□ 0.67
CPS1P31327 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CPS1P31327 PDLIM1P1-201ENST00000604187 969 ntBASIC19.24■□□□□ 0.67
CPS1P31327 SNORA50D-202ENST00000627561 132 ntBASIC19.24■□□□□ 0.67
CPS1P31327 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPS1P31327 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPS1P31327 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 AC106872.9-201ENST00000512437 1393 ntBASIC19.23■□□□□ 0.67
CPS1P31327 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CPS1P31327 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPS1P31327 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 TNRC18P2-201ENST00000417666 2714 ntBASIC19.23■□□□□ 0.67
CPS1P31327 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC19.23■□□□□ 0.67
CPS1P31327 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC19.23■□□□□ 0.67
CPS1P31327 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPS1P31327 AC005077.3-201ENST00000449614 213 ntBASIC19.23■□□□□ 0.67
CPS1P31327 RN7SL452P-201ENST00000482923 291 ntBASIC19.23■□□□□ 0.67
CPS1P31327 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
CPS1P31327 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC19.23■□□□□ 0.67
CPS1P31327 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC19.23■□□□□ 0.67
CPS1P31327 HNRNPA1P11-201ENST00000580106 956 ntBASIC19.23■□□□□ 0.67
CPS1P31327 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC19.23■□□□□ 0.67
CPS1P31327 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.23■□□□□ 0.67
CPS1P31327 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC19.23■□□□□ 0.67
CPS1P31327 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.23■□□□□ 0.67
CPS1P31327 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.23■□□□□ 0.67
CPS1P31327 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPS1P31327 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.23■□□□□ 0.67
CPS1P31327 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CPS1P31327 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms