Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LCN1P31025 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
LCN1P31025 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LCN1P31025 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LCN1P31025 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.16□□□□□ -0.3
LCN1P31025 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LCN1P31025 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LCN1P31025 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.15□□□□□ -0.3
LCN1P31025 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.15□□□□□ -0.3
LCN1P31025 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.15□□□□□ -0.3
LCN1P31025 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
LCN1P31025 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 NUTM2HP-201ENST00000442076 2498 ntBASIC13.15□□□□□ -0.3
LCN1P31025 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 AL591122.2-201ENST00000624125 1853 ntBASIC13.15□□□□□ -0.3
LCN1P31025 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.15□□□□□ -0.3
LCN1P31025 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.15□□□□□ -0.3
LCN1P31025 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 RN7SL530P-201ENST00000485097 298 ntBASIC13.15□□□□□ -0.3
LCN1P31025 AC108725.1-201ENST00000495472 409 ntBASIC13.15□□□□□ -0.3
LCN1P31025 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.15□□□□□ -0.3
LCN1P31025 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 AC093752.3-201ENST00000567343 901 ntBASIC13.15□□□□□ -0.3
LCN1P31025 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.15□□□□□ -0.3
LCN1P31025 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 AL118558.3-201ENST00000607414 1079 ntBASIC13.15□□□□□ -0.3
LCN1P31025 MIR6869-201ENST00000619434 62 ntBASIC13.15□□□□□ -0.3
LCN1P31025 NAP1L6-202ENST00000641404 1222 ntBASIC13.15□□□□□ -0.3
LCN1P31025 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LCN1P31025 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LCN1P31025 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LCN1P31025 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LCN1P31025 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCN1P31025 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LCN1P31025 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.15□□□□□ -0.31
LCN1P31025 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LCN1P31025 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
LCN1P31025 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
LCN1P31025 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 LINC01815-202ENST00000641468 1409 ntBASIC13.14□□□□□ -0.31
LCN1P31025 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
LCN1P31025 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.14□□□□□ -0.31
LCN1P31025 NKAIN1P1-201ENST00000435754 582 ntBASIC13.14□□□□□ -0.31
LCN1P31025 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 EIF4HP1-201ENST00000453115 687 ntBASIC13.14□□□□□ -0.31
LCN1P31025 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.14□□□□□ -0.31
LCN1P31025 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.14□□□□□ -0.31
LCN1P31025 MIR3615-201ENST00000581999 87 ntBASIC13.14□□□□□ -0.31
LCN1P31025 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.14□□□□□ -0.31
LCN1P31025 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
LCN1P31025 CR392039.2-201ENST00000623182 509 ntBASIC13.14□□□□□ -0.31
LCN1P31025 AL805961.1-203ENST00000641078 1258 ntBASIC13.14□□□□□ -0.31
LCN1P31025 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.14□□□□□ -0.31
LCN1P31025 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms