Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.46□□□□□ -0.41
ATF1P18846 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
ATF1P18846 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.46□□□□□ -0.42
ATF1P18846 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
ATF1P18846 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
ATF1P18846 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.46□□□□□ -0.42
ATF1P18846 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ATF1P18846 AGGF1P10-201ENST00000635005 2191 ntBASIC12.46□□□□□ -0.42
ATF1P18846 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
ATF1P18846 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.46□□□□□ -0.42
ATF1P18846 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.46□□□□□ -0.42
ATF1P18846 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ATF1P18846 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
ATF1P18846 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
ATF1P18846 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATF1P18846 PI4KAP2-201ENST00000360806 2080 ntBASIC12.46□□□□□ -0.42
ATF1P18846 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.46□□□□□ -0.42
ATF1P18846 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.45□□□□□ -0.42
ATF1P18846 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 AC010141.1-201ENST00000411585 623 ntBASIC12.45□□□□□ -0.42
ATF1P18846 AC112492.5-201ENST00000421897 457 ntBASIC12.45□□□□□ -0.42
ATF1P18846 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.45□□□□□ -0.42
ATF1P18846 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.45□□□□□ -0.42
ATF1P18846 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
ATF1P18846 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.45□□□□□ -0.42
ATF1P18846 AC007551.1-201ENST00000457394 519 ntBASIC12.45□□□□□ -0.42
ATF1P18846 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.45□□□□□ -0.42
ATF1P18846 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.45□□□□□ -0.42
ATF1P18846 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 BTNL10-201ENST00000595971 695 ntBASIC12.45□□□□□ -0.42
ATF1P18846 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 AC008735.3-201ENST00000596646 500 ntBASIC12.45□□□□□ -0.42
ATF1P18846 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.45□□□□□ -0.42
ATF1P18846 CR392039.2-201ENST00000623182 509 ntBASIC12.45□□□□□ -0.42
ATF1P18846 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 KRT8P4-201ENST00000509735 1454 ntBASIC12.45□□□□□ -0.42
ATF1P18846 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ATF1P18846 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.45□□□□□ -0.42
ATF1P18846 SALL4P6-201ENST00000429385 1691 ntBASIC12.45□□□□□ -0.42
ATF1P18846 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ATF1P18846 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ATF1P18846 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.44□□□□□ -0.42
ATF1P18846 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ATF1P18846 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ATF1P18846 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.44□□□□□ -0.42
ATF1P18846 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms