Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.62■□□□□ 0.25
TOP1P11387 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.61■□□□□ 0.25
TOP1P11387 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TOP1P11387 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.61■□□□□ 0.25
TOP1P11387 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.61■□□□□ 0.25
TOP1P11387 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TOP1P11387 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TOP1P11387 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.61■□□□□ 0.25
TOP1P11387 BX679664.3-201ENST00000414070 555 ntBASIC16.61■□□□□ 0.25
TOP1P11387 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 FGFR3P1-201ENST00000449999 601 ntBASIC16.61■□□□□ 0.25
TOP1P11387 AC113935.1-201ENST00000471722 555 ntBASIC16.61■□□□□ 0.25
TOP1P11387 AC005740.1-201ENST00000515639 522 ntBASIC16.61■□□□□ 0.25
TOP1P11387 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TOP1P11387 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.61■□□□□ 0.25
TOP1P11387 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.61■□□□□ 0.25
TOP1P11387 MIR4522-201ENST00000584932 87 ntBASIC16.61■□□□□ 0.25
TOP1P11387 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.61■□□□□ 0.25
TOP1P11387 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 AL021707.6-201ENST00000609212 491 ntBASIC16.61■□□□□ 0.25
TOP1P11387 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.61■□□□□ 0.25
TOP1P11387 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
TOP1P11387 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TOP1P11387 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TOP1P11387 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOP1P11387 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.61■□□□□ 0.25
TOP1P11387 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.6■□□□□ 0.25
TOP1P11387 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TOP1P11387 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.6■□□□□ 0.25
TOP1P11387 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.6■□□□□ 0.25
TOP1P11387 RPL18AP8-201ENST00000486071 528 ntBASIC16.6■□□□□ 0.25
TOP1P11387 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.6■□□□□ 0.25
TOP1P11387 GOLGA2P8-201ENST00000505201 779 ntBASIC16.6■□□□□ 0.25
TOP1P11387 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.6■□□□□ 0.25
TOP1P11387 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.6■□□□□ 0.25
TOP1P11387 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.6■□□□□ 0.25
TOP1P11387 AC138894.2-201ENST00000602838 371 ntBASIC16.6■□□□□ 0.25
TOP1P11387 AL133467.4-201ENST00000602953 725 ntBASIC16.6■□□□□ 0.25
TOP1P11387 AC005632.3-201ENST00000605544 308 ntBASIC16.6■□□□□ 0.25
TOP1P11387 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 CICP16-201ENST00000502609 2813 ntBASIC16.6■□□□□ 0.25
TOP1P11387 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 AL590824.1-201ENST00000403828 1349 ntBASIC16.6■□□□□ 0.25
TOP1P11387 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.6■□□□□ 0.25
TOP1P11387 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TOP1P11387 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TOP1P11387 AC016397.2-201ENST00000624848 1985 ntBASIC16.6■□□□□ 0.25
TOP1P11387 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TOP1P11387 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms