Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AHCYP4-201ENST00000419201 1315 ntBASIC14.22□□□□□ -0.13
APOA4P06727 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 MEX3B-202ENST00000558133 4333 ntBASIC14.22□□□□□ -0.13
APOA4P06727 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.22□□□□□ -0.13
APOA4P06727 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 AC104306.2-201ENST00000451877 341 ntBASIC14.22□□□□□ -0.13
APOA4P06727 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 SCARNA21-201ENST00000517026 139 ntBASIC14.22□□□□□ -0.13
APOA4P06727 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.22□□□□□ -0.13
APOA4P06727 AC126915.1-201ENST00000522847 1038 ntBASIC14.22□□□□□ -0.13
APOA4P06727 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.22□□□□□ -0.13
APOA4P06727 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.22□□□□□ -0.13
APOA4P06727 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.22□□□□□ -0.13
APOA4P06727 AL591471.1-201ENST00000621855 229 ntBASIC14.22□□□□□ -0.13
APOA4P06727 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.22□□□□□ -0.13
APOA4P06727 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 AC004923.1-202ENST00000642106 209 ntBASIC14.22□□□□□ -0.13
APOA4P06727 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 ABCD1P2-201ENST00000429313 1601 ntBASIC14.22□□□□□ -0.13
APOA4P06727 AL359845.1-201ENST00000458202 1648 ntBASIC14.22□□□□□ -0.13
APOA4P06727 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.22□□□□□ -0.13
APOA4P06727 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.21□□□□□ -0.13
APOA4P06727 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.21□□□□□ -0.13
APOA4P06727 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
APOA4P06727 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.21□□□□□ -0.13
APOA4P06727 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA4P06727 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
APOA4P06727 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
APOA4P06727 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
APOA4P06727 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
APOA4P06727 MKRN5P-201ENST00000445263 1467 ntBASIC14.21□□□□□ -0.13
APOA4P06727 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
APOA4P06727 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA4P06727 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 MIR1908-201ENST00000410394 80 ntBASIC14.21□□□□□ -0.13
APOA4P06727 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.21□□□□□ -0.13
APOA4P06727 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.21□□□□□ -0.13
APOA4P06727 VDAC1P1-201ENST00000439229 848 ntBASIC14.21□□□□□ -0.13
APOA4P06727 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA4P06727 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.21□□□□□ -0.13
APOA4P06727 AC003686.1-201ENST00000550956 1034 ntBASIC14.21□□□□□ -0.13
APOA4P06727 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.21□□□□□ -0.13
APOA4P06727 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.21□□□□□ -0.13
APOA4P06727 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.21□□□□□ -0.13
APOA4P06727 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.21□□□□□ -0.13
APOA4P06727 AC022748.3-201ENST00000621828 275 ntBASIC14.21□□□□□ -0.13
APOA4P06727 AL008638.5-201ENST00000623814 1298 ntBASIC14.21□□□□□ -0.13
APOA4P06727 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA4P06727 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA4P06727 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.21□□□□□ -0.13
APOA4P06727 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
APOA4P06727 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA4P06727 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA4P06727 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA4P06727 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA4P06727 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
APOA4P06727 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA4P06727 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms