Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC009812.1-201ENST00000605948 1059 ntBASIC17.96■□□□□ 0.47
COL5A2P05997 AC211476.2-201ENST00000608799 708 ntBASIC17.96■□□□□ 0.47
COL5A2P05997 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC17.96■□□□□ 0.47
COL5A2P05997 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.96■□□□□ 0.47
COL5A2P05997 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
COL5A2P05997 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC17.96■□□□□ 0.47
COL5A2P05997 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC17.96■□□□□ 0.47
COL5A2P05997 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC17.96■□□□□ 0.47
COL5A2P05997 AC008038.1-201ENST00000634247 1314 ntBASIC17.96■□□□□ 0.47
COL5A2P05997 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COL5A2P05997 ERG-211ENST00000453032 1595 ntTSL 2 BASIC17.96■□□□□ 0.46
COL5A2P05997 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COL5A2P05997 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
COL5A2P05997 MKRN7P-201ENST00000433469 1371 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
COL5A2P05997 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL5A2P05997 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 CA5BP1-205ENST00000435806 1064 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 RNASEH2CP1-201ENST00000454281 502 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 RN7SL646P-201ENST00000492969 297 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 AL450346.2-201ENST00000495602 1024 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC17.95■□□□□ 0.46
COL5A2P05997 TPST2P1-201ENST00000564073 1102 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 AP000553.2-201ENST00000609038 441 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 OR3A1-202ENST00000615105 966 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC17.95■□□□□ 0.46
COL5A2P05997 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC17.95■□□□□ 0.46
COL5A2P05997 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC17.95■□□□□ 0.46
COL5A2P05997 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
COL5A2P05997 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COL5A2P05997 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC17.95■□□□□ 0.46
COL5A2P05997 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.95■□□□□ 0.46
COL5A2P05997 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL5A2P05997 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.95■□□□□ 0.46
COL5A2P05997 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC17.95■□□□□ 0.46
COL5A2P05997 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
COL5A2P05997 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.95■□□□□ 0.46
COL5A2P05997 AC020763.3-201ENST00000625095 2904 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.95■□□□□ 0.46
COL5A2P05997 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL5A2P05997 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL5A2P05997 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC17.95■□□□□ 0.46
COL5A2P05997 TULP3P1-202ENST00000453253 1291 ntBASIC17.95■□□□□ 0.46
COL5A2P05997 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC17.95■□□□□ 0.46
COL5A2P05997 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC17.95■□□□□ 0.46
COL5A2P05997 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC17.95■□□□□ 0.46
COL5A2P05997 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC17.95■□□□□ 0.46
COL5A2P05997 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
COL5A2P05997 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.94■□□□□ 0.46
COL5A2P05997 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.94■□□□□ 0.46
COL5A2P05997 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
COL5A2P05997 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 DDC-212ENST00000615193 1674 ntTSL 3 BASIC17.94■□□□□ 0.46
COL5A2P05997 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
COL5A2P05997 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL5A2P05997 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 LINC02486-201ENST00000604157 3000 ntBASIC17.94■□□□□ 0.46
COL5A2P05997 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.94■□□□□ 0.46
COL5A2P05997 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC17.94■□□□□ 0.46
COL5A2P05997 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.94■□□□□ 0.46
COL5A2P05997 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.94■□□□□ 0.46
COL5A2P05997 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC17.94■□□□□ 0.46
COL5A2P05997 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL5A2P05997 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
COL5A2P05997 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
COL5A2P05997 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC17.94■□□□□ 0.46
COL5A2P05997 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC17.94■□□□□ 0.46
COL5A2P05997 ASLP1-201ENST00000428790 637 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms