Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.89■□□□□ 0.3
POLR3DP05423 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR3DP05423 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR3DP05423 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR3DP05423 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR3DP05423 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR3DP05423 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.89■□□□□ 0.29
POLR3DP05423 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR3DP05423 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR3DP05423 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
POLR3DP05423 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.89■□□□□ 0.29
POLR3DP05423 AC005740.1-201ENST00000515639 522 ntBASIC16.89■□□□□ 0.29
POLR3DP05423 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.89■□□□□ 0.29
POLR3DP05423 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.89■□□□□ 0.29
POLR3DP05423 NDUFB10P1-201ENST00000567319 521 ntBASIC16.89■□□□□ 0.29
POLR3DP05423 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
POLR3DP05423 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.89■□□□□ 0.29
POLR3DP05423 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 U62317.3-201ENST00000608319 855 ntBASIC16.89■□□□□ 0.29
POLR3DP05423 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
POLR3DP05423 AC084781.1-201ENST00000613737 656 ntBASIC16.89■□□□□ 0.29
POLR3DP05423 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR3DP05423 AC006372.4-201ENST00000624122 1543 ntBASIC16.89■□□□□ 0.29
POLR3DP05423 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.89■□□□□ 0.29
POLR3DP05423 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
POLR3DP05423 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR3DP05423 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR3DP05423 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.88■□□□□ 0.29
POLR3DP05423 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.88■□□□□ 0.29
POLR3DP05423 USP17L6P-201ENST00000382470 1197 ntBASIC16.88■□□□□ 0.29
POLR3DP05423 HLA-DMA-203ENST00000395305 777 ntBASIC16.88■□□□□ 0.29
POLR3DP05423 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.88■□□□□ 0.29
POLR3DP05423 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.88■□□□□ 0.29
POLR3DP05423 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.88■□□□□ 0.29
POLR3DP05423 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.88■□□□□ 0.29
POLR3DP05423 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.88■□□□□ 0.29
POLR3DP05423 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.88■□□□□ 0.29
POLR3DP05423 RN7SL665P-201ENST00000578793 300 ntBASIC16.88■□□□□ 0.29
POLR3DP05423 RPL17P45-201ENST00000586289 509 ntBASIC16.88■□□□□ 0.29
POLR3DP05423 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.88■□□□□ 0.29
POLR3DP05423 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
POLR3DP05423 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
POLR3DP05423 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
POLR3DP05423 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
POLR3DP05423 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.88■□□□□ 0.29
POLR3DP05423 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.88■□□□□ 0.29
POLR3DP05423 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.88■□□□□ 0.29
POLR3DP05423 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
POLR3DP05423 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR3DP05423 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
POLR3DP05423 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.87■□□□□ 0.29
POLR3DP05423 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.87■□□□□ 0.29
POLR3DP05423 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms