Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 AC015909.5-201ENST00000624336 2266 ntBASIC12.66□□□□□ -0.38
ZIC3O60481 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.66□□□□□ -0.38
ZIC3O60481 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 MIR33B-201ENST00000385104 96 ntBASIC12.66□□□□□ -0.38
ZIC3O60481 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.66□□□□□ -0.38
ZIC3O60481 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.66□□□□□ -0.38
ZIC3O60481 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ZIC3O60481 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
ZIC3O60481 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.66□□□□□ -0.38
ZIC3O60481 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
ZIC3O60481 OR5BD1P-201ENST00000532527 817 ntBASIC12.66□□□□□ -0.38
ZIC3O60481 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.66□□□□□ -0.38
ZIC3O60481 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.66□□□□□ -0.38
ZIC3O60481 MIR3147-201ENST00000577811 66 ntBASIC12.66□□□□□ -0.38
ZIC3O60481 AC087045.2-201ENST00000606279 1003 ntBASIC12.66□□□□□ -0.38
ZIC3O60481 AC007881.3-201ENST00000608897 607 ntBASIC12.66□□□□□ -0.38
ZIC3O60481 AC091769.1-201ENST00000619576 568 ntBASIC12.66□□□□□ -0.38
ZIC3O60481 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ZIC3O60481 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ZIC3O60481 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.66□□□□□ -0.38
ZIC3O60481 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.66□□□□□ -0.38
ZIC3O60481 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ZIC3O60481 FMO6P-201ENST00000236166 1620 ntBASIC12.66□□□□□ -0.38
ZIC3O60481 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.66□□□□□ -0.38
ZIC3O60481 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 AC067750.1-201ENST00000608826 6545 ntBASIC12.65□□□□□ -0.38
ZIC3O60481 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 GRK6P1-201ENST00000400595 1711 ntBASIC12.65□□□□□ -0.38
ZIC3O60481 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.65□□□□□ -0.38
ZIC3O60481 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.65□□□□□ -0.38
ZIC3O60481 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ZIC3O60481 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.65□□□□□ -0.38
ZIC3O60481 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.65□□□□□ -0.38
ZIC3O60481 GRPEL2P1-201ENST00000453145 339 ntBASIC12.65□□□□□ -0.38
ZIC3O60481 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
ZIC3O60481 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.65□□□□□ -0.38
ZIC3O60481 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
ZIC3O60481 AP002803.1-201ENST00000528836 498 ntBASIC12.65□□□□□ -0.38
ZIC3O60481 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
ZIC3O60481 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.65□□□□□ -0.38
ZIC3O60481 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.65□□□□□ -0.38
ZIC3O60481 RPL17P45-201ENST00000586289 509 ntBASIC12.65□□□□□ -0.38
ZIC3O60481 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.65□□□□□ -0.38
ZIC3O60481 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.65□□□□□ -0.38
ZIC3O60481 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 AC007250.1-201ENST00000608934 338 ntBASIC12.65□□□□□ -0.38
ZIC3O60481 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
ZIC3O60481 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 AL139424.3-202ENST00000641619 917 ntBASIC12.65□□□□□ -0.38
ZIC3O60481 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.65□□□□□ -0.38
ZIC3O60481 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.65□□□□□ -0.38
ZIC3O60481 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms