Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC78A2IDD5 LINC00115-201ENST00000473798 1317 ntBASIC14.41□□□□□ -0.1
CCDC78A2IDD5 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 FAM90A7P-201ENST00000382628 1395 ntBASIC14.4□□□□□ -0.1
CCDC78A2IDD5 FAM90A23P-201ENST00000400136 1395 ntBASIC14.4□□□□□ -0.1
CCDC78A2IDD5 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 BRWD1P1-201ENST00000401091 371 ntBASIC14.4□□□□□ -0.1
CCDC78A2IDD5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 FAM58BP-201ENST00000439056 645 ntBASIC14.4□□□□□ -0.1
CCDC78A2IDD5 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 MIR4538-201ENST00000581377 78 ntBASIC14.4□□□□□ -0.1
CCDC78A2IDD5 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 AC091271.1-201ENST00000611877 1162 ntBASIC14.4□□□□□ -0.1
CCDC78A2IDD5 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 PCDHA6-201ENST00000378126 3267 ntBASIC14.4□□□□□ -0.1
CCDC78A2IDD5 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC78A2IDD5 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
CCDC78A2IDD5 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 AP002353.1-201ENST00000528257 1599 ntBASIC14.39□□□□□ -0.11
CCDC78A2IDD5 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 AC092580.1-201ENST00000433998 658 ntBASIC14.39□□□□□ -0.11
CCDC78A2IDD5 AL591846.1-201ENST00000451736 433 ntBASIC14.39□□□□□ -0.11
CCDC78A2IDD5 TUBB8P8-201ENST00000458717 1058 ntBASIC14.39□□□□□ -0.11
CCDC78A2IDD5 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC78A2IDD5 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms