Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 AL499627.2-201ENST00000606283 725 ntBASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 DUX4L4-201ENST00000566884 1269 ntBASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
HS3ST3A1Q9Y663 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
HS3ST3A1Q9Y663 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
HS3ST3A1Q9Y663 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
HS3ST3A1Q9Y663 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 MIR5787-201ENST00000611784 55 ntBASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 MIR6821-201ENST00000617625 74 ntBASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
HS3ST3A1Q9Y663 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST3A1Q9Y663 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST3A1Q9Y663 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
HS3ST3A1Q9Y663 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
HS3ST3A1Q9Y663 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
HS3ST3A1Q9Y663 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST3A1Q9Y663 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST3A1Q9Y663 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HS3ST3A1Q9Y663 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 AC133637.1-201ENST00000624115 1537 ntBASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 AC126544.1-201ENST00000580842 1059 ntBASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
HS3ST3A1Q9Y663 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 AC097381.1-201ENST00000429019 1296 ntBASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HS3ST3A1Q9Y663 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HS3ST3A1Q9Y663 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
HS3ST3A1Q9Y663 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HS3ST3A1Q9Y663 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
HS3ST3A1Q9Y663 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.16■■□□□ 1.14
HS3ST3A1Q9Y663 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HS3ST3A1Q9Y663 AC144652.1-201ENST00000609974 1624 ntBASIC22.16■■□□□ 1.14
HS3ST3A1Q9Y663 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HS3ST3A1Q9Y663 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 LINC00543-201ENST00000567234 1845 ntBASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 SLC47A1P1-202ENST00000449666 945 ntBASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HS3ST3A1Q9Y663 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.14■■□□□ 1.14
HS3ST3A1Q9Y663 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.14■■□□□ 1.14
HS3ST3A1Q9Y663 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
HS3ST3A1Q9Y663 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HS3ST3A1Q9Y663 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HS3ST3A1Q9Y663 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
HS3ST3A1Q9Y663 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.14■■□□□ 1.13
HS3ST3A1Q9Y663 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.14■■□□□ 1.13
HS3ST3A1Q9Y663 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.14■■□□□ 1.13
HS3ST3A1Q9Y663 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.14■■□□□ 1.13
HS3ST3A1Q9Y663 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HS3ST3A1Q9Y663 LINC01529-204ENST00000636474 1715 ntBASIC22.14■■□□□ 1.13
HS3ST3A1Q9Y663 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.14■■□□□ 1.13
HS3ST3A1Q9Y663 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms