Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA5Q9Y5H7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDHA5Q9Y5H7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
PCDHA5Q9Y5H7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA5Q9Y5H7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA5Q9Y5H7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
PCDHA5Q9Y5H7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA5Q9Y5H7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA5Q9Y5H7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
PCDHA5Q9Y5H7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHA5Q9Y5H7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHA5Q9Y5H7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.2■■□□□ 1.63
PCDHA5Q9Y5H7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
PCDHA5Q9Y5H7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA5Q9Y5H7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA5Q9Y5H7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHA5Q9Y5H7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA5Q9Y5H7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA5Q9Y5H7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA5Q9Y5H7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA5Q9Y5H7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHA5Q9Y5H7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA5Q9Y5H7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
PCDHA5Q9Y5H7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA5Q9Y5H7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
PCDHA5Q9Y5H7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA5Q9Y5H7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA5Q9Y5H7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA5Q9Y5H7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDHA5Q9Y5H7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA5Q9Y5H7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA5Q9Y5H7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA5Q9Y5H7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
PCDHA5Q9Y5H7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA5Q9Y5H7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PCDHA5Q9Y5H7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHA5Q9Y5H7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PCDHA5Q9Y5H7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA5Q9Y5H7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA5Q9Y5H7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.15■■□□□ 1.62
PCDHA5Q9Y5H7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHA5Q9Y5H7 AC103724.3-201ENST00000564481 992 ntBASIC25.15■■□□□ 1.62
PCDHA5Q9Y5H7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHA5Q9Y5H7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHA5Q9Y5H7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA5Q9Y5H7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHA5Q9Y5H7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA5Q9Y5H7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA5Q9Y5H7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHA5Q9Y5H7 GUSBP5-202ENST00000510805 1989 ntBASIC25.14■■□□□ 1.61
PCDHA5Q9Y5H7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
PCDHA5Q9Y5H7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.14■■□□□ 1.61
PCDHA5Q9Y5H7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA5Q9Y5H7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA5Q9Y5H7 KRT8P33-201ENST00000508125 1423 ntBASIC25.13■■□□□ 1.61
PCDHA5Q9Y5H7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA5Q9Y5H7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA5Q9Y5H7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDHA5Q9Y5H7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHA5Q9Y5H7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.13■■□□□ 1.61
PCDHA5Q9Y5H7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDHA5Q9Y5H7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 SNX5-217ENST00000606557 1087 ntBASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 AL353803.4-201ENST00000565882 1934 ntBASIC25.12■■□□□ 1.61
PCDHA5Q9Y5H7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA5Q9Y5H7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA5Q9Y5H7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHA5Q9Y5H7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDHA5Q9Y5H7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHA5Q9Y5H7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHA5Q9Y5H7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHA5Q9Y5H7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA5Q9Y5H7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.1■■□□□ 1.61
PCDHA5Q9Y5H7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
PCDHA5Q9Y5H7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA5Q9Y5H7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA5Q9Y5H7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA5Q9Y5H7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA5Q9Y5H7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA5Q9Y5H7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms