Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 AC004448.1-201ENST00000458332 883 ntBASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHA9Q9Y5H5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 LINC00526-201ENST00000581067 1875 ntBASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHA9Q9Y5H5 GUSBP5-202ENST00000510805 1989 ntBASIC21.61■■□□□ 1.05
PCDHA9Q9Y5H5 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHA9Q9Y5H5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA9Q9Y5H5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHA9Q9Y5H5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA9Q9Y5H5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 ALDH1A3-203ENST00000557963 1670 ntBASIC21.6■■□□□ 1.05
PCDHA9Q9Y5H5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA9Q9Y5H5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 BX664725.1-201ENST00000438252 379 ntBASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.58■■□□□ 1.05
PCDHA9Q9Y5H5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
PCDHA9Q9Y5H5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHA9Q9Y5H5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHA9Q9Y5H5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHA9Q9Y5H5 AC021242.3-201ENST00000607598 1377 ntBASIC21.58■■□□□ 1.04
PCDHA9Q9Y5H5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHA9Q9Y5H5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHA9Q9Y5H5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 ECEL1P1-201ENST00000373592 1742 ntBASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PCDHA9Q9Y5H5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 SNX5-217ENST00000606557 1087 ntBASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms