Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA2Q9Y5H1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGA2Q9Y5H1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGA2Q9Y5H1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA2Q9Y5H1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 MIR572-201ENST00000384983 95 ntBASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 AC012414.1-201ENST00000556676 535 ntBASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGA2Q9Y5H1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGA2Q9Y5H1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PCDHGA2Q9Y5H1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
PCDHGA2Q9Y5H1 MIR6084-201ENST00000622012 110 ntBASIC22.8■■□□□ 1.24
PCDHGA2Q9Y5H1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHGA2Q9Y5H1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PCDHGA2Q9Y5H1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 IGHV3-19-201ENST00000521488 291 ntBASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDHGA2Q9Y5H1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 KRT18P14-201ENST00000534205 1250 ntBASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA2Q9Y5H1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
PCDHGA2Q9Y5H1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 TERF1P2-201ENST00000583350 1212 ntBASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 pRNA.6-201ENST00000610482 90 ntBASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 pRNA.5-201ENST00000612139 90 ntBASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 pRNA.11-201ENST00000618423 90 ntBASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 pRNA.13-201ENST00000619112 90 ntBASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 LINC02228-203ENST00000641970 1355 ntBASIC22.76■■□□□ 1.23
PCDHGA2Q9Y5H1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA2Q9Y5H1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
PCDHGA2Q9Y5H1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA2Q9Y5H1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA2Q9Y5H1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGA2Q9Y5H1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms