Protein–RNA interactions for Protein: Q9Y2T2

AP3M1, AP-3 complex subunit mu-1, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M1Q9Y2T2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP3M1Q9Y2T2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP3M1Q9Y2T2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 DUX4L9-201ENST00000449051 1259 ntBASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.21■□□□□ 0.99
AP3M1Q9Y2T2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
AP3M1Q9Y2T2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP3M1Q9Y2T2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.19■□□□□ 0.98
AP3M1Q9Y2T2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP3M1Q9Y2T2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP3M1Q9Y2T2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
AP3M1Q9Y2T2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 AC019171.1-201ENST00000601251 1056 ntBASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3M1Q9Y2T2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 AC079630.1-202ENST00000618127 1840 ntBASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3M1Q9Y2T2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.16■□□□□ 0.98
AP3M1Q9Y2T2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3M1Q9Y2T2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3M1Q9Y2T2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
AP3M1Q9Y2T2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.16■□□□□ 0.98
AP3M1Q9Y2T2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3M1Q9Y2T2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3M1Q9Y2T2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP3M1Q9Y2T2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP3M1Q9Y2T2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
AP3M1Q9Y2T2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
AP3M1Q9Y2T2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3M1Q9Y2T2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3M1Q9Y2T2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3M1Q9Y2T2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.14■□□□□ 0.97
AP3M1Q9Y2T2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
AP3M1Q9Y2T2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
AP3M1Q9Y2T2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3M1Q9Y2T2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3M1Q9Y2T2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3M1Q9Y2T2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3M1Q9Y2T2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3M1Q9Y2T2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3M1Q9Y2T2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3M1Q9Y2T2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3M1Q9Y2T2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms