Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
NCKAP1Q9Y2A7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
NCKAP1Q9Y2A7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
NCKAP1Q9Y2A7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NCKAP1Q9Y2A7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NCKAP1Q9Y2A7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
NCKAP1Q9Y2A7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.57■■□□□ 1.2
NCKAP1Q9Y2A7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.57■■□□□ 1.2
NCKAP1Q9Y2A7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NCKAP1Q9Y2A7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.57■■□□□ 1.2
NCKAP1Q9Y2A7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NCKAP1Q9Y2A7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NCKAP1Q9Y2A7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NCKAP1Q9Y2A7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.56■■□□□ 1.2
NCKAP1Q9Y2A7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NCKAP1Q9Y2A7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.56■■□□□ 1.2
NCKAP1Q9Y2A7 AC126544.1-201ENST00000580842 1059 ntBASIC22.56■■□□□ 1.2
NCKAP1Q9Y2A7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.56■■□□□ 1.2
NCKAP1Q9Y2A7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
NCKAP1Q9Y2A7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.56■■□□□ 1.2
NCKAP1Q9Y2A7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NCKAP1Q9Y2A7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.55■■□□□ 1.2
NCKAP1Q9Y2A7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.55■■□□□ 1.2
NCKAP1Q9Y2A7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NCKAP1Q9Y2A7 AC138932.3-201ENST00000567634 1902 ntBASIC22.55■■□□□ 1.2
NCKAP1Q9Y2A7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
NCKAP1Q9Y2A7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 MIR6821-201ENST00000617625 74 ntBASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCKAP1Q9Y2A7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCKAP1Q9Y2A7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCKAP1Q9Y2A7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.52■■□□□ 1.2
NCKAP1Q9Y2A7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NCKAP1Q9Y2A7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.52■■□□□ 1.2
NCKAP1Q9Y2A7 AC092666.2-201ENST00000613287 246 ntBASIC22.52■■□□□ 1.2
NCKAP1Q9Y2A7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NCKAP1Q9Y2A7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
NCKAP1Q9Y2A7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
NCKAP1Q9Y2A7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
NCKAP1Q9Y2A7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
NCKAP1Q9Y2A7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 AC097381.1-201ENST00000429019 1296 ntBASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NCKAP1Q9Y2A7 FP325331.1-202ENST00000623531 1380 ntBASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NCKAP1Q9Y2A7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 AC104564.3-201ENST00000582367 638 ntBASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NCKAP1Q9Y2A7 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms