Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 KRT19P1-201ENST00000405746 1186 ntBASIC9.52□□□□□ -0.89
MACF1Q9UPN3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 KRT18P35-201ENST00000510488 1269 ntBASIC9.52□□□□□ -0.89
MACF1Q9UPN3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MACF1Q9UPN3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 KRT18P11-201ENST00000435214 1283 ntBASIC9.51□□□□□ -0.89
MACF1Q9UPN3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 SNORA78-201ENST00000459373 127 ntBASIC9.51□□□□□ -0.89
MACF1Q9UPN3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
MACF1Q9UPN3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 ABCB10P3-201ENST00000561950 2166 ntBASIC9.5□□□□□ -0.89
MACF1Q9UPN3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 ADM-205ENST00000528544 586 ntTSL 2 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 SLC29A4P1-201ENST00000398760 971 ntBASIC9.5□□□□□ -0.89
MACF1Q9UPN3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 RNA5SP413-201ENST00000516373 109 ntBASIC9.5□□□□□ -0.89
MACF1Q9UPN3 AC142381.4-202ENST00000563973 229 ntBASIC9.5□□□□□ -0.89
MACF1Q9UPN3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
MACF1Q9UPN3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 AC133041.1-202ENST00000642053 222 ntBASIC9.49□□□□□ -0.89
MACF1Q9UPN3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 MFSD11-216ENST00000590393 1141 ntBASIC9.49□□□□□ -0.89
MACF1Q9UPN3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
MACF1Q9UPN3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms