Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NOTCH3Q9UM47 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 ID1-201ENST00000376105 1233 ntBASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.22■□□□□ 0.35
NOTCH3Q9UM47 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 AC022211.4-201ENST00000625094 2161 ntBASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.21■□□□□ 0.35
NOTCH3Q9UM47 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 YBX1P1-201ENST00000445822 960 ntBASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 AC123595.1-201ENST00000440769 1046 ntBASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NOTCH3Q9UM47 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 AL358852.1-201ENST00000623174 1268 ntBASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.19■□□□□ 0.34
NOTCH3Q9UM47 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms