Protein–RNA interactions for Protein: Q9NUN7

ACER3, Alkaline ceramidase 3, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3Q9NUN7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACER3Q9NUN7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ACER3Q9NUN7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.89■□□□□ 0.93
ACER3Q9NUN7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
ACER3Q9NUN7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.89■□□□□ 0.93
ACER3Q9NUN7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACER3Q9NUN7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACER3Q9NUN7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ACER3Q9NUN7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.88■□□□□ 0.93
ACER3Q9NUN7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACER3Q9NUN7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACER3Q9NUN7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACER3Q9NUN7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ACER3Q9NUN7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACER3Q9NUN7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACER3Q9NUN7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 LINC00565-201ENST00000562710 2331 ntBASIC20.86■□□□□ 0.93
ACER3Q9NUN7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 ALDH1A3-203ENST00000557963 1670 ntBASIC20.86■□□□□ 0.93
ACER3Q9NUN7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACER3Q9NUN7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACER3Q9NUN7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
ACER3Q9NUN7 GUSBP5-202ENST00000510805 1989 ntBASIC20.85■□□□□ 0.93
ACER3Q9NUN7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACER3Q9NUN7 BX664725.1-201ENST00000438252 379 ntBASIC20.85■□□□□ 0.93
ACER3Q9NUN7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACER3Q9NUN7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.85■□□□□ 0.93
ACER3Q9NUN7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ACER3Q9NUN7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ACER3Q9NUN7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.85■□□□□ 0.93
ACER3Q9NUN7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 AL451085.2-201ENST00000605085 799 ntBASIC20.84■□□□□ 0.93
ACER3Q9NUN7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 AC021242.3-201ENST00000607598 1377 ntBASIC20.84■□□□□ 0.93
ACER3Q9NUN7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.84■□□□□ 0.93
ACER3Q9NUN7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 AC004448.1-201ENST00000458332 883 ntBASIC20.83■□□□□ 0.93
ACER3Q9NUN7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ACER3Q9NUN7 LINC00526-201ENST00000581067 1875 ntBASIC20.83■□□□□ 0.92
ACER3Q9NUN7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ACER3Q9NUN7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ACER3Q9NUN7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.83■□□□□ 0.92
ACER3Q9NUN7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 Z92544.1-202ENST00000571933 1220 ntBASIC20.82■□□□□ 0.92
ACER3Q9NUN7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.82■□□□□ 0.92
ACER3Q9NUN7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms