Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTPS2Q9NRF8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
CTPS2Q9NRF8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTPS2Q9NRF8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTPS2Q9NRF8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 DUSP8P3-201ENST00000399571 1760 ntBASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTPS2Q9NRF8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 C1orf229-201ENST00000623686 2258 ntBASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 AL451085.2-201ENST00000605085 799 ntBASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTPS2Q9NRF8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.8■□□□□ 0.92
CTPS2Q9NRF8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 BX664725.1-201ENST00000438252 379 ntBASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CTPS2Q9NRF8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 AC009299.2-201ENST00000482477 511 ntBASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS2Q9NRF8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS2Q9NRF8 AC233723.2-201ENST00000623798 2106 ntBASIC20.77■□□□□ 0.91
CTPS2Q9NRF8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTPS2Q9NRF8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CTPS2Q9NRF8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTPS2Q9NRF8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 AC021242.3-201ENST00000607598 1377 ntBASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 AC004448.1-201ENST00000458332 883 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms