Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH18Q9HCL0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH18Q9HCL0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 AC010997.5-201ENST00000609182 354 ntBASIC23.33■■□□□ 1.33
PCDH18Q9HCL0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 UNC93B8-201ENST00000511903 705 ntBASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH18Q9HCL0 AC133561.1-201ENST00000568600 2415 ntBASIC23.31■■□□□ 1.32
PCDH18Q9HCL0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
PCDH18Q9HCL0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH18Q9HCL0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH18Q9HCL0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH18Q9HCL0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDH18Q9HCL0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDH18Q9HCL0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH18Q9HCL0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH18Q9HCL0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PCDH18Q9HCL0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDH18Q9HCL0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDH18Q9HCL0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDH18Q9HCL0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH18Q9HCL0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDH18Q9HCL0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH18Q9HCL0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH18Q9HCL0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH18Q9HCL0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH18Q9HCL0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDH18Q9HCL0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH18Q9HCL0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDH18Q9HCL0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDH18Q9HCL0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH18Q9HCL0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PCDH18Q9HCL0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH18Q9HCL0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH18Q9HCL0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 AC012676.1-201ENST00000574705 1949 ntBASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH18Q9HCL0 AL353803.4-201ENST00000565882 1934 ntBASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 GUSBP5-201ENST00000418136 578 ntBASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PCDH18Q9HCL0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms