Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 AC007375.3-201ENST00000600936 2314 ntBASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SND1-IT1Q9HBX3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 AC007029.1-201ENST00000604183 313 ntBASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.99□□□□□ -0.01
SND1-IT1Q9HBX3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 AC022413.1-201ENST00000624602 984 ntBASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SND1-IT1Q9HBX3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 GFER-205ENST00000569451 517 ntTSL 5 BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 RAP2CP1-202ENST00000605179 643 ntBASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SND1-IT1Q9HBX3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SND1-IT1Q9HBX3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SND1-IT1Q9HBX3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SND1-IT1Q9HBX3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SND1-IT1Q9HBX3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SND1-IT1Q9HBX3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SND1-IT1Q9HBX3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms