Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.17■■□□□ 1.14
POPDC3Q9HBV1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.17■■□□□ 1.14
POPDC3Q9HBV1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
POPDC3Q9HBV1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
POPDC3Q9HBV1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POPDC3Q9HBV1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
POPDC3Q9HBV1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
POPDC3Q9HBV1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.16■■□□□ 1.14
POPDC3Q9HBV1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
POPDC3Q9HBV1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POPDC3Q9HBV1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
POPDC3Q9HBV1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POPDC3Q9HBV1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POPDC3Q9HBV1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 AC005703.6-201ENST00000623265 1329 ntBASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
POPDC3Q9HBV1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
POPDC3Q9HBV1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
POPDC3Q9HBV1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
POPDC3Q9HBV1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
POPDC3Q9HBV1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
POPDC3Q9HBV1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.13
POPDC3Q9HBV1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
POPDC3Q9HBV1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.14■■□□□ 1.13
POPDC3Q9HBV1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.14■■□□□ 1.13
POPDC3Q9HBV1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
POPDC3Q9HBV1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
POPDC3Q9HBV1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 Z92544.1-202ENST00000571933 1220 ntBASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 AL353803.4-201ENST00000565882 1934 ntBASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 AC079834.2-201ENST00000609776 1949 ntBASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 AC144652.1-201ENST00000609974 1624 ntBASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 C1orf229-201ENST00000623686 2258 ntBASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
POPDC3Q9HBV1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.12■■□□□ 1.13
POPDC3Q9HBV1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.12■■□□□ 1.13
POPDC3Q9HBV1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
POPDC3Q9HBV1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 AC233723.2-201ENST00000623798 2106 ntBASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 AL117328.2-201ENST00000624617 1940 ntBASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
POPDC3Q9HBV1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
POPDC3Q9HBV1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
POPDC3Q9HBV1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.1■■□□□ 1.13
POPDC3Q9HBV1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.1■■□□□ 1.13
POPDC3Q9HBV1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.1■■□□□ 1.13
POPDC3Q9HBV1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
POPDC3Q9HBV1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.1■■□□□ 1.13
POPDC3Q9HBV1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
POPDC3Q9HBV1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
POPDC3Q9HBV1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
POPDC3Q9HBV1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
POPDC3Q9HBV1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
POPDC3Q9HBV1 AC092028.1-203ENST00000608262 953 ntBASIC22.09■■□□□ 1.13
POPDC3Q9HBV1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
POPDC3Q9HBV1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 ESRRAP2-201ENST00000418437 1549 ntBASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
POPDC3Q9HBV1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
POPDC3Q9HBV1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.08■■□□□ 1.12
POPDC3Q9HBV1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
POPDC3Q9HBV1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
POPDC3Q9HBV1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
POPDC3Q9HBV1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms