Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 MIR6722-201ENST00000617286 78 ntBASIC21.72■■□□□ 1.07
SOX17Q9H6I2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 AC004448.1-201ENST00000458332 883 ntBASIC21.71■■□□□ 1.07
SOX17Q9H6I2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SOX17Q9H6I2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SOX17Q9H6I2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.7■■□□□ 1.07
SOX17Q9H6I2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SOX17Q9H6I2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 AL136116.3-201ENST00000402907 1138 ntBASIC21.7■■□□□ 1.06
SOX17Q9H6I2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.7■■□□□ 1.06
SOX17Q9H6I2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 AC131274.2-201ENST00000580697 1507 ntBASIC21.69■■□□□ 1.06
SOX17Q9H6I2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.69■■□□□ 1.06
SOX17Q9H6I2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOX17Q9H6I2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX17Q9H6I2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOX17Q9H6I2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX17Q9H6I2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX17Q9H6I2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.68■■□□□ 1.06
SOX17Q9H6I2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.68■■□□□ 1.06
SOX17Q9H6I2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.67■■□□□ 1.06
SOX17Q9H6I2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SOX17Q9H6I2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SOX17Q9H6I2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX17Q9H6I2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.66■■□□□ 1.06
SOX17Q9H6I2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX17Q9H6I2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX17Q9H6I2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX17Q9H6I2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SOX17Q9H6I2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX17Q9H6I2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX17Q9H6I2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 MIR4466-201ENST00000606121 54 ntBASIC21.65■■□□□ 1.06
SOX17Q9H6I2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX17Q9H6I2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SOX17Q9H6I2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SOX17Q9H6I2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.64■■□□□ 1.05
SOX17Q9H6I2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
SOX17Q9H6I2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX17Q9H6I2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX17Q9H6I2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SOX17Q9H6I2 EP400NL-214ENST00000641289 2402 ntBASIC21.63■■□□□ 1.05
SOX17Q9H6I2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SOX17Q9H6I2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms