Protein–RNA interactions for Protein: Q9H6D8

FNDC4, Fibronectin type III domain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC4Q9H6D8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 TSPY13P-201ENST00000338964 914 ntBASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 CLDN5-201ENST00000403084 2357 ntBASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.74■□□□□ 0.43
FNDC4Q9H6D8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 EP400NL-214ENST00000641289 2402 ntBASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.73■□□□□ 0.43
FNDC4Q9H6D8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 AC079630.1-202ENST00000618127 1840 ntBASIC17.72■□□□□ 0.43
FNDC4Q9H6D8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 AC004448.1-201ENST00000458332 883 ntBASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FNDC4Q9H6D8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
FNDC4Q9H6D8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.7■□□□□ 0.42
FNDC4Q9H6D8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC4Q9H6D8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC4Q9H6D8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.68■□□□□ 0.42
FNDC4Q9H6D8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC4Q9H6D8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC4Q9H6D8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.68■□□□□ 0.42
FNDC4Q9H6D8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.68■□□□□ 0.42
FNDC4Q9H6D8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
FNDC4Q9H6D8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC4Q9H6D8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.67■□□□□ 0.42
FNDC4Q9H6D8 GUSBP5-202ENST00000510805 1989 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms