Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN3Q9H347 AC005703.6-201ENST00000623265 1329 ntBASIC20.79■□□□□ 0.92
UBQLN3Q9H347 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.79■□□□□ 0.92
UBQLN3Q9H347 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN3Q9H347 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN3Q9H347 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 MIR4466-201ENST00000606121 54 ntBASIC20.77■□□□□ 0.92
UBQLN3Q9H347 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
UBQLN3Q9H347 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
UBQLN3Q9H347 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN3Q9H347 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.75■□□□□ 0.91
UBQLN3Q9H347 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.74■□□□□ 0.91
UBQLN3Q9H347 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
UBQLN3Q9H347 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.74■□□□□ 0.91
UBQLN3Q9H347 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN3Q9H347 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms