Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCRT1Q9BWW7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18■□□□□ 0.47
SCRT1Q9BWW7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SCRT1Q9BWW7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SCRT1Q9BWW7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18■□□□□ 0.47
SCRT1Q9BWW7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18■□□□□ 0.47
SCRT1Q9BWW7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18■□□□□ 0.47
SCRT1Q9BWW7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCRT1Q9BWW7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCRT1Q9BWW7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCRT1Q9BWW7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18■□□□□ 0.47
SCRT1Q9BWW7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCRT1Q9BWW7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SCRT1Q9BWW7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SCRT1Q9BWW7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 FBXW4P1-201ENST00000426721 2239 ntBASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SCRT1Q9BWW7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCRT1Q9BWW7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 AC026310.3-201ENST00000625186 2373 ntBASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.97■□□□□ 0.47
SCRT1Q9BWW7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 RAP2CP1-202ENST00000605179 643 ntBASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.96■□□□□ 0.47
SCRT1Q9BWW7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.96■□□□□ 0.46
SCRT1Q9BWW7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCRT1Q9BWW7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 ESRRAP2-201ENST00000418437 1549 ntBASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCRT1Q9BWW7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms