Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.33■□□□□ 0.2
TM2D3Q9BRN9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM2D3Q9BRN9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM2D3Q9BRN9 AC145676.1-201ENST00000514988 2004 ntBASIC16.33■□□□□ 0.2
TM2D3Q9BRN9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM2D3Q9BRN9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TM2D3Q9BRN9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 AC133637.1-201ENST00000624115 1537 ntBASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 AC092437.1-201ENST00000624794 1048 ntBASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM2D3Q9BRN9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 AC091060.1-201ENST00000623524 1766 ntBASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 AL499627.2-201ENST00000606283 725 ntBASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM2D3Q9BRN9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 MIR6084-201ENST00000622012 110 ntBASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TM2D3Q9BRN9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 CCDC92B-201ENST00000575506 885 ntBASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.27■□□□□ 0.2
TM2D3Q9BRN9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TM2D3Q9BRN9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TM2D3Q9BRN9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.27■□□□□ 0.19
TM2D3Q9BRN9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.27■□□□□ 0.19
TM2D3Q9BRN9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM2D3Q9BRN9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM2D3Q9BRN9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM2D3Q9BRN9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TM2D3Q9BRN9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM2D3Q9BRN9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM2D3Q9BRN9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms