Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXC2Q99958 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXC2Q99958 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXC2Q99958 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXC2Q99958 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXC2Q99958 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXC2Q99958 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXC2Q99958 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.02■□□□□ 0.64
FOXC2Q99958 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXC2Q99958 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXC2Q99958 AC137761.2-201ENST00000561729 223 ntBASIC19.02■□□□□ 0.64
FOXC2Q99958 AC145350.3-201ENST00000569033 163 ntBASIC19.02■□□□□ 0.64
FOXC2Q99958 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FOXC2Q99958 AC141586.4-201ENST00000624558 1573 ntBASIC19.02■□□□□ 0.63
FOXC2Q99958 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.01■□□□□ 0.63
FOXC2Q99958 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXC2Q99958 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
FOXC2Q99958 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
FOXC2Q99958 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.01■□□□□ 0.63
FOXC2Q99958 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
FOXC2Q99958 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.01■□□□□ 0.63
FOXC2Q99958 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXC2Q99958 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXC2Q99958 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXC2Q99958 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXC2Q99958 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
FOXC2Q99958 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
FOXC2Q99958 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19■□□□□ 0.63
FOXC2Q99958 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19■□□□□ 0.63
FOXC2Q99958 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19■□□□□ 0.63
FOXC2Q99958 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
FOXC2Q99958 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19■□□□□ 0.63
FOXC2Q99958 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
FOXC2Q99958 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXC2Q99958 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXC2Q99958 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19■□□□□ 0.63
FOXC2Q99958 AL109923.1-201ENST00000618799 583 ntBASIC19■□□□□ 0.63
FOXC2Q99958 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19■□□□□ 0.63
FOXC2Q99958 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXC2Q99958 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19■□□□□ 0.63
FOXC2Q99958 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXC2Q99958 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
FOXC2Q99958 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXC2Q99958 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
FOXC2Q99958 AL355802.2-201ENST00000402069 882 ntBASIC18.99■□□□□ 0.63
FOXC2Q99958 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXC2Q99958 AC006970.2-201ENST00000450065 779 ntBASIC18.99■□□□□ 0.63
FOXC2Q99958 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
FOXC2Q99958 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
FOXC2Q99958 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXC2Q99958 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXC2Q99958 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXC2Q99958 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXC2Q99958 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXC2Q99958 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.98■□□□□ 0.63
FOXC2Q99958 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXC2Q99958 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXC2Q99958 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXC2Q99958 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.98■□□□□ 0.63
FOXC2Q99958 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
FOXC2Q99958 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXC2Q99958 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXC2Q99958 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXC2Q99958 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXC2Q99958 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.98■□□□□ 0.63
FOXC2Q99958 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXC2Q99958 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXC2Q99958 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXC2Q99958 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXC2Q99958 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXC2Q99958 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXC2Q99958 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
FOXC2Q99958 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXC2Q99958 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXC2Q99958 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXC2Q99958 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
FOXC2Q99958 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXC2Q99958 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXC2Q99958 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.97■□□□□ 0.63
FOXC2Q99958 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXC2Q99958 AC066615.1-201ENST00000640911 628 ntBASIC18.97■□□□□ 0.63
FOXC2Q99958 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXC2Q99958 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXC2Q99958 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXC2Q99958 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FOXC2Q99958 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXC2Q99958 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXC2Q99958 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXC2Q99958 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXC2Q99958 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXC2Q99958 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.96■□□□□ 0.63
FOXC2Q99958 BID-214ENST00000617586 542 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXC2Q99958 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.96■□□□□ 0.63
FOXC2Q99958 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXC2Q99958 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXC2Q99958 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXC2Q99958 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXC2Q99958 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXC2Q99958 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
FOXC2Q99958 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms