Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 pRNA.6-201ENST00000610482 90 ntBASIC21.82■■□□□ 1.08
SLC38A3Q99624 pRNA.5-201ENST00000612139 90 ntBASIC21.82■■□□□ 1.08
SLC38A3Q99624 pRNA.11-201ENST00000618423 90 ntBASIC21.82■■□□□ 1.08
SLC38A3Q99624 pRNA.13-201ENST00000619112 90 ntBASIC21.82■■□□□ 1.08
SLC38A3Q99624 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC38A3Q99624 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC38A3Q99624 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC38A3Q99624 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC38A3Q99624 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC38A3Q99624 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SLC38A3Q99624 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC38A3Q99624 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC38A3Q99624 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC38A3Q99624 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC38A3Q99624 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC38A3Q99624 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC38A3Q99624 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC38A3Q99624 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC38A3Q99624 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC38A3Q99624 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC38A3Q99624 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.81■■□□□ 1.08
SLC38A3Q99624 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC38A3Q99624 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC38A3Q99624 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SLC38A3Q99624 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC38A3Q99624 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SLC38A3Q99624 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC38A3Q99624 RASA4CP-201ENST00000424092 1398 ntBASIC21.8■■□□□ 1.08
SLC38A3Q99624 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC38A3Q99624 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC38A3Q99624 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC38A3Q99624 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC38A3Q99624 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A3Q99624 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC38A3Q99624 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A3Q99624 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A3Q99624 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A3Q99624 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A3Q99624 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC38A3Q99624 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC38A3Q99624 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC38A3Q99624 CA15P2-201ENST00000611168 834 ntBASIC21.79■■□□□ 1.08
SLC38A3Q99624 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC38A3Q99624 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A3Q99624 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A3Q99624 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SLC38A3Q99624 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC38A3Q99624 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A3Q99624 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC38A3Q99624 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC38A3Q99624 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC38A3Q99624 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC38A3Q99624 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC38A3Q99624 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC38A3Q99624 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SLC38A3Q99624 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SLC38A3Q99624 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC38A3Q99624 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC38A3Q99624 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A3Q99624 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC38A3Q99624 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A3Q99624 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A3Q99624 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A3Q99624 AC099791.1-201ENST00000416440 715 ntBASIC21.77■■□□□ 1.08
SLC38A3Q99624 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A3Q99624 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.77■■□□□ 1.08
SLC38A3Q99624 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
SLC38A3Q99624 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A3Q99624 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.77■■□□□ 1.07
SLC38A3Q99624 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC38A3Q99624 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC38A3Q99624 LINC01124-201ENST00000409786 2117 ntBASIC21.76■■□□□ 1.07
SLC38A3Q99624 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SLC38A3Q99624 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SLC38A3Q99624 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC38A3Q99624 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC38A3Q99624 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC38A3Q99624 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC38A3Q99624 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC38A3Q99624 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.75■■□□□ 1.07
SLC38A3Q99624 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A3Q99624 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A3Q99624 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SLC38A3Q99624 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A3Q99624 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC38A3Q99624 AC233992.3-201ENST00000607491 485 ntBASIC21.75■■□□□ 1.07
SLC38A3Q99624 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A3Q99624 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A3Q99624 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A3Q99624 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A3Q99624 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A3Q99624 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A3Q99624 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A3Q99624 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A3Q99624 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A3Q99624 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A3Q99624 BX842568.3-201ENST00000418104 571 ntBASIC21.74■■□□□ 1.07
SLC38A3Q99624 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC38A3Q99624 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC38A3Q99624 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms