Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 AL359504.2-201ENST00000605506 1601 ntBASIC21.17■□□□□ 0.98
NR1H4Q96RI1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NR1H4Q96RI1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.16■□□□□ 0.98
NR1H4Q96RI1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NR1H4Q96RI1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NR1H4Q96RI1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NR1H4Q96RI1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NR1H4Q96RI1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NR1H4Q96RI1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NR1H4Q96RI1 AC139530.1-201ENST00000575312 1977 ntBASIC21.15■□□□□ 0.98
NR1H4Q96RI1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NR1H4Q96RI1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.15■□□□□ 0.98
NR1H4Q96RI1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.14■□□□□ 0.98
NR1H4Q96RI1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NR1H4Q96RI1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NR1H4Q96RI1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.14■□□□□ 0.98
NR1H4Q96RI1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NR1H4Q96RI1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NR1H4Q96RI1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NR1H4Q96RI1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NR1H4Q96RI1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.14■□□□□ 0.97
NR1H4Q96RI1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NR1H4Q96RI1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NR1H4Q96RI1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.13■□□□□ 0.97
NR1H4Q96RI1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR1H4Q96RI1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NR1H4Q96RI1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 RPS2P35-201ENST00000443417 897 ntBASIC21.1■□□□□ 0.97
NR1H4Q96RI1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.1■□□□□ 0.97
NR1H4Q96RI1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms