Protein–RNA interactions for Protein: Q96Q42

ALS2, Alsin, humanhuman

Predictions only

Length 1,657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2Q96Q42 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ALS2Q96Q42 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
ALS2Q96Q42 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
ALS2Q96Q42 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ALS2Q96Q42 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.72■■■□□ 2.51
ALS2Q96Q42 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.72■■■□□ 2.51
ALS2Q96Q42 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ALS2Q96Q42 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC30.72■■■□□ 2.51
ALS2Q96Q42 HLA-L-209ENST00000420110 1011 ntBASIC30.72■■■□□ 2.51
ALS2Q96Q42 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC30.72■■■□□ 2.51
ALS2Q96Q42 AC133637.1-201ENST00000624115 1537 ntBASIC30.72■■■□□ 2.51
ALS2Q96Q42 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.71■■■□□ 2.51
ALS2Q96Q42 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
ALS2Q96Q42 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.71■■■□□ 2.51
ALS2Q96Q42 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ALS2Q96Q42 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.71■■■□□ 2.51
ALS2Q96Q42 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ALS2Q96Q42 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.71■■■□□ 2.51
ALS2Q96Q42 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
ALS2Q96Q42 AL499627.2-201ENST00000606283 725 ntBASIC30.71■■■□□ 2.51
ALS2Q96Q42 ALDH1A3-203ENST00000557963 1670 ntBASIC30.7■■■□□ 2.51
ALS2Q96Q42 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
ALS2Q96Q42 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC30.7■■■□□ 2.5
ALS2Q96Q42 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.7■■■□□ 2.5
ALS2Q96Q42 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ALS2Q96Q42 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.7■■■□□ 2.5
ALS2Q96Q42 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ALS2Q96Q42 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC30.69■■■□□ 2.5
ALS2Q96Q42 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC30.69■■■□□ 2.5
ALS2Q96Q42 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC30.69■■■□□ 2.5
ALS2Q96Q42 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ALS2Q96Q42 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
ALS2Q96Q42 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ALS2Q96Q42 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
ALS2Q96Q42 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC30.68■■■□□ 2.5
ALS2Q96Q42 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC30.68■■■□□ 2.5
ALS2Q96Q42 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.68■■■□□ 2.5
ALS2Q96Q42 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 NT5C3AP1-201ENST00000394500 1012 ntBASIC30.68■■■□□ 2.5
ALS2Q96Q42 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ALS2Q96Q42 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.68■■■□□ 2.5
ALS2Q96Q42 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ALS2Q96Q42 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
ALS2Q96Q42 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ALS2Q96Q42 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ALS2Q96Q42 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ALS2Q96Q42 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.67■■■□□ 2.5
ALS2Q96Q42 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
ALS2Q96Q42 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.67■■■□□ 2.5
ALS2Q96Q42 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC30.67■■■□□ 2.5
ALS2Q96Q42 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC30.67■■■□□ 2.5
ALS2Q96Q42 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC30.66■■■□□ 2.5
ALS2Q96Q42 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.66■■■□□ 2.5
ALS2Q96Q42 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ALS2Q96Q42 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ALS2Q96Q42 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ALS2Q96Q42 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ALS2Q96Q42 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ALS2Q96Q42 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
ALS2Q96Q42 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ALS2Q96Q42 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ALS2Q96Q42 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 GXYLT1P2-201ENST00000433312 1230 ntBASIC30.65■■■□□ 2.5
ALS2Q96Q42 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ALS2Q96Q42 NTF6G-201ENST00000591094 616 ntBASIC30.65■■■□□ 2.5
ALS2Q96Q42 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC30.65■■■□□ 2.5
ALS2Q96Q42 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ALS2Q96Q42 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.63■■■□□ 2.49
ALS2Q96Q42 AL121749.1-202ENST00000609313 2153 ntBASIC30.63■■■□□ 2.49
ALS2Q96Q42 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
ALS2Q96Q42 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC30.63■■■□□ 2.49
ALS2Q96Q42 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC30.63■■■□□ 2.49
ALS2Q96Q42 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC30.63■■■□□ 2.49
ALS2Q96Q42 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
ALS2Q96Q42 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
ALS2Q96Q42 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ALS2Q96Q42 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC30.63■■■□□ 2.49
ALS2Q96Q42 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ALS2Q96Q42 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC30.62■■■□□ 2.49
ALS2Q96Q42 AC006015.1-201ENST00000429970 570 ntBASIC30.62■■■□□ 2.49
ALS2Q96Q42 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ALS2Q96Q42 HLA-L-211ENST00000482052 1765 ntBASIC30.62■■■□□ 2.49
ALS2Q96Q42 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms