Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.61■□□□□ 0.25
ODF3Q96PU9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.61■□□□□ 0.25
ODF3Q96PU9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ODF3Q96PU9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.61■□□□□ 0.25
ODF3Q96PU9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ODF3Q96PU9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.61■□□□□ 0.25
ODF3Q96PU9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ODF3Q96PU9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.61■□□□□ 0.25
ODF3Q96PU9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.61■□□□□ 0.25
ODF3Q96PU9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.6■□□□□ 0.25
ODF3Q96PU9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ODF3Q96PU9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ODF3Q96PU9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.6■□□□□ 0.25
ODF3Q96PU9 BX664725.1-201ENST00000438252 379 ntBASIC16.6■□□□□ 0.25
ODF3Q96PU9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.6■□□□□ 0.25
ODF3Q96PU9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ODF3Q96PU9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ODF3Q96PU9 AC021242.3-201ENST00000607598 1377 ntBASIC16.6■□□□□ 0.25
ODF3Q96PU9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ODF3Q96PU9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
ODF3Q96PU9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.6■□□□□ 0.25
ODF3Q96PU9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ODF3Q96PU9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ODF3Q96PU9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
ODF3Q96PU9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ODF3Q96PU9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ODF3Q96PU9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ODF3Q96PU9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
ODF3Q96PU9 AC005703.6-201ENST00000623265 1329 ntBASIC16.59■□□□□ 0.25
ODF3Q96PU9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.59■□□□□ 0.25
ODF3Q96PU9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.59■□□□□ 0.25
ODF3Q96PU9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ODF3Q96PU9 ESRRAP2-201ENST00000418437 1549 ntBASIC16.59■□□□□ 0.25
ODF3Q96PU9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ODF3Q96PU9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ODF3Q96PU9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ODF3Q96PU9 AC079834.2-201ENST00000609776 1949 ntBASIC16.58■□□□□ 0.25
ODF3Q96PU9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
ODF3Q96PU9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
ODF3Q96PU9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ODF3Q96PU9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ODF3Q96PU9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ODF3Q96PU9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ODF3Q96PU9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.58■□□□□ 0.24
ODF3Q96PU9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ODF3Q96PU9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ODF3Q96PU9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ODF3Q96PU9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ODF3Q96PU9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ODF3Q96PU9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ODF3Q96PU9 C9orf163-202ENST00000624034 2573 ntBASIC16.58■□□□□ 0.24
ODF3Q96PU9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ODF3Q96PU9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ODF3Q96PU9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ODF3Q96PU9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
ODF3Q96PU9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ODF3Q96PU9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.57■□□□□ 0.24
ODF3Q96PU9 AC144652.1-201ENST00000609974 1624 ntBASIC16.57■□□□□ 0.24
ODF3Q96PU9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ODF3Q96PU9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ODF3Q96PU9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ODF3Q96PU9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.57■□□□□ 0.24
ODF3Q96PU9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ODF3Q96PU9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ODF3Q96PU9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
ODF3Q96PU9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.56■□□□□ 0.24
ODF3Q96PU9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
ODF3Q96PU9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ODF3Q96PU9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ODF3Q96PU9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ODF3Q96PU9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ODF3Q96PU9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ODF3Q96PU9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.56■□□□□ 0.24
ODF3Q96PU9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.56■□□□□ 0.24
ODF3Q96PU9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
ODF3Q96PU9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ODF3Q96PU9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ODF3Q96PU9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ODF3Q96PU9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ODF3Q96PU9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.55■□□□□ 0.24
ODF3Q96PU9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ODF3Q96PU9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.55■□□□□ 0.24
ODF3Q96PU9 AL117328.2-201ENST00000624617 1940 ntBASIC16.55■□□□□ 0.24
ODF3Q96PU9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ODF3Q96PU9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.55■□□□□ 0.24
ODF3Q96PU9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ODF3Q96PU9 Z92544.1-202ENST00000571933 1220 ntBASIC16.55■□□□□ 0.24
ODF3Q96PU9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ODF3Q96PU9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.55■□□□□ 0.24
ODF3Q96PU9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ODF3Q96PU9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ODF3Q96PU9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms