Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 AC083906.2-201ENST00000511578 360 ntBASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 AC010331.1-201ENST00000611423 582 ntBASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP3BQ96NU0 DRD5P2-201ENST00000421395 2012 ntBASIC21.58■■□□□ 1.05
CNTNAP3BQ96NU0 AC090877.2-201ENST00000558441 1738 ntBASIC21.58■■□□□ 1.05
CNTNAP3BQ96NU0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.58■■□□□ 1.05
CNTNAP3BQ96NU0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.58■■□□□ 1.05
CNTNAP3BQ96NU0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTNAP3BQ96NU0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP3BQ96NU0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CNTNAP3BQ96NU0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP3BQ96NU0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.57■■□□□ 1.04
CNTNAP3BQ96NU0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP3BQ96NU0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP3BQ96NU0 AC011767.1-201ENST00000617410 1153 ntBASIC21.57■■□□□ 1.04
CNTNAP3BQ96NU0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP3BQ96NU0 C17orf82-201ENST00000623772 1530 ntBASIC21.56■■□□□ 1.04
CNTNAP3BQ96NU0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP3BQ96NU0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTNAP3BQ96NU0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CNTNAP3BQ96NU0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP3BQ96NU0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP3BQ96NU0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CNTNAP3BQ96NU0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CNTNAP3BQ96NU0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.55■■□□□ 1.04
CNTNAP3BQ96NU0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CNTNAP3BQ96NU0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP3BQ96NU0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP3BQ96NU0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP3BQ96NU0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.54■■□□□ 1.04
CNTNAP3BQ96NU0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP3BQ96NU0 AL139393.2-201ENST00000608721 2025 ntBASIC21.54■■□□□ 1.04
CNTNAP3BQ96NU0 FOXO3B-201ENST00000395675 1928 ntBASIC21.54■■□□□ 1.04
CNTNAP3BQ96NU0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP3BQ96NU0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP3BQ96NU0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 BX255925.1-201ENST00000566954 1854 ntBASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP3BQ96NU0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 GUSBP6-202ENST00000438529 1198 ntBASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CNTNAP3BQ96NU0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CNTNAP3BQ96NU0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CNTNAP3BQ96NU0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CNTNAP3BQ96NU0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 RPS2P4-201ENST00000476944 856 ntBASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP3BQ96NU0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 AL050303.2-201ENST00000619798 666 ntBASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP3BQ96NU0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms