Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.15■■■□□ 2.42
CFAP53Q96M91 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFAP53Q96M91 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CFAP53Q96M91 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC30.15■■■□□ 2.42
CFAP53Q96M91 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CFAP53Q96M91 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CFAP53Q96M91 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP53Q96M91 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP53Q96M91 AL139246.5-201ENST00000606645 996 ntBASIC30.14■■■□□ 2.42
CFAP53Q96M91 AC110285.6-201ENST00000617652 491 ntBASIC30.14■■■□□ 2.42
CFAP53Q96M91 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP53Q96M91 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC30.14■■■□□ 2.41
CFAP53Q96M91 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
CFAP53Q96M91 SYT6-210ENST00000641643 1587 ntBASIC30.13■■■□□ 2.41
CFAP53Q96M91 UNC93B3-201ENST00000308076 687 ntBASIC30.13■■■□□ 2.41
CFAP53Q96M91 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP53Q96M91 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP53Q96M91 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFAP53Q96M91 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFAP53Q96M91 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFAP53Q96M91 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
CFAP53Q96M91 AC144652.1-201ENST00000609974 1624 ntBASIC30.12■■■□□ 2.41
CFAP53Q96M91 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CFAP53Q96M91 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFAP53Q96M91 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC30.12■■■□□ 2.41
CFAP53Q96M91 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.12■■■□□ 2.41
CFAP53Q96M91 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFAP53Q96M91 FP325331.1-202ENST00000623531 1380 ntBASIC30.12■■■□□ 2.41
CFAP53Q96M91 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
CFAP53Q96M91 AC006455.2-201ENST00000429931 906 ntBASIC30.11■■■□□ 2.41
CFAP53Q96M91 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.11■■■□□ 2.41
CFAP53Q96M91 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CFAP53Q96M91 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CFAP53Q96M91 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC30.11■■■□□ 2.41
CFAP53Q96M91 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP53Q96M91 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP53Q96M91 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP53Q96M91 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC30.1■■■□□ 2.41
CFAP53Q96M91 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.1■■■□□ 2.41
CFAP53Q96M91 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP53Q96M91 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC30.1■■■□□ 2.41
CFAP53Q96M91 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CFAP53Q96M91 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP53Q96M91 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP53Q96M91 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP53Q96M91 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP53Q96M91 AL136162.1-201ENST00000607711 1078 ntBASIC30.09■■■□□ 2.41
CFAP53Q96M91 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CFAP53Q96M91 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CFAP53Q96M91 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CFAP53Q96M91 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.08■■■□□ 2.41
CFAP53Q96M91 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
CFAP53Q96M91 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CFAP53Q96M91 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
CFAP53Q96M91 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP53Q96M91 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP53Q96M91 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
CFAP53Q96M91 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP53Q96M91 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP53Q96M91 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
CFAP53Q96M91 SERBP1P1-201ENST00000396021 1160 ntBASIC30.07■■■□□ 2.4
CFAP53Q96M91 PTCHD3P2-201ENST00000424937 1205 ntBASIC30.07■■■□□ 2.4
CFAP53Q96M91 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP53Q96M91 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.07■■■□□ 2.4
CFAP53Q96M91 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.07■■■□□ 2.4
CFAP53Q96M91 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP53Q96M91 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP53Q96M91 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP53Q96M91 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CFAP53Q96M91 AC079630.1-202ENST00000618127 1840 ntBASIC30.06■■■□□ 2.4
CFAP53Q96M91 AL138724.1-201ENST00000606771 1088 ntBASIC30.06■■■□□ 2.4
CFAP53Q96M91 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC30.06■■■□□ 2.4
CFAP53Q96M91 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC30.06■■■□□ 2.4
CFAP53Q96M91 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC30.06■■■□□ 2.4
CFAP53Q96M91 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
CFAP53Q96M91 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
CFAP53Q96M91 PBX2P1-201ENST00000493219 1291 ntBASIC30.05■■■□□ 2.4
CFAP53Q96M91 DUX4L4-201ENST00000566884 1269 ntBASIC30.05■■■□□ 2.4
CFAP53Q96M91 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.05■■■□□ 2.4
CFAP53Q96M91 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
CFAP53Q96M91 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC30.05■■■□□ 2.4
CFAP53Q96M91 LINC01529-204ENST00000636474 1715 ntBASIC30.05■■■□□ 2.4
CFAP53Q96M91 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 AC135279.3-201ENST00000610945 1311 ntBASIC30.04■■■□□ 2.4
CFAP53Q96M91 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
CFAP53Q96M91 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.04■■■□□ 2.4
CFAP53Q96M91 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.04■■■□□ 2.4
CFAP53Q96M91 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.04■■■□□ 2.4
CFAP53Q96M91 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.04■■■□□ 2.4
CFAP53Q96M91 AC106739.1-201ENST00000617035 715 ntBASIC30.04■■■□□ 2.4
CFAP53Q96M91 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 H19-210ENST00000439725 1929 ntTSL 2 BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms